BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C07LP1|AL426493
(806 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1571 1587 0.0
>3x_Contig1571
Length = 13536
Score = 1587 bits (800), Expect = 0.0
Identities = 804/806 (99%)
Strand = Plus / Plus
Query: 1 atccgagcttaacaattgaagaccctcgtagtcttcttccgagttttcgtgcatagactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3897 atccgagcttaacaattgaagaccctcgtagtcttcttccgagttttcgtgcatagactt 3956
Query: 61 tatagagcgtagttcttgttcaccggtgtaatggatctgtaagtcgacatcatttgcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3957 tatagagcgtagttcttgttcaccggtgtaatggatctgtaagtcgacatcatttgcttt 4016
Query: 121 gaggactcttagttcctgaatatagcagtccaaaattgatagatctcttaaggaccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4017 gaggactcttagttcctgaatatagcagtccaaaattgatagatctcttaaggaccaaat 4076
Query: 181 tagtttgatggaagtttgtcttaaatcaacatcatgttctaatgttttgacaataaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4077 tagtttgatggaagtttgtcttaaatcaacatcatgttctaatgttttgacaataaatgc 4136
Query: 241 aagggaggatggtacaccagtaccgccggctattaacaaagcgttattccataatccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4137 aagggaggatggtacaccagtaccgccggctattaacaaagcgttattccataatccacc 4196
Query: 301 ttcaagcggttcgccatatggaccttcaacggcaacacgcatttctactttgccgttgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4197 ttcaagcggttcgccatatggaccttcaacggcaacacgcatttctactttgccgttgta 4256
Query: 361 aggaatatactcacttaaccttctagtaataccttcttttaccgctaatacaatgacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4257 aggaatatactcacttaaccttctagtaataccttcttttaccgctaatacaatgacaag 4316
Query: 421 attgttgccatgtactaaggaatccatgacagaaaatggatgcgcttgccagaaaagggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4317 attgttgccatgtactaaggaatccatgacagaaaatggatgcgcttgccagaaaagggt 4376
Query: 481 tggagtgataaagtggatgtaacaatattgacctggtttggcatgccagttgttcgcggt 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4377 tggagtaataaagtggatgtaacaatattgacctggtttggcatgccagttgttcgcggt 4436
Query: 541 gatggggattgataatctgatgtacttatcatggaacaattgcaaagttgcacgttgtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4437 gatggggattgataatctgatgtacttatcatggaacaattgcaaagttgcacgttgtga 4496
Query: 601 cccaaatctgaaaattttgaacaatctgaatagtctatccagaacccaaaacacgatggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4497 cccaaatctgaaaattttgaacaatctgaatagtctatccagaacccaaaacacgatggt 4556
Query: 661 gactgcraggaattcgttccaaccgatttgagcacaatgtttccataaaaataccaagac 720
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4557 gactgcaaggaattcgttccaaccgatttgagcacaatgtttccataaaaataccaagac 4616
Query: 721 caaagatacaagtagaatgtgactgagtaggaagaattcgtaataatgatttctgaagaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4617 caaagatacaagtagaatgtgactgagtaggaagaattcgtaataatgatttctgaagaa 4676
Query: 781 aaagaacgagaaaaggataataccac 806
||||||||||||||||||||||||||
Sbjct: 4677 aaagaacgagaaaaggataataccac 4702
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5906
Number of Sequences: 1807
Number of extensions: 5906
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 806
length of database: 10,358,551
effective HSP length: 16
effective length of query: 790
effective length of database: 10,329,639
effective search space: 8160414810
effective search space used: 8160414810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)